rs50562321 SNP Detail

Summary

• ID
  rs50562321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32602441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAACAGAA TGGATAAAGA
  AATCCACCAC TTCGTCTCTG CTTCTTCATC TCCAGAGTGG GGCACGTCTT GTGGGTGGAC
  TGACTTGGCA CTTAAAAATG AAGGTGAGCG GTCATGGGGA GGGTGGAAAA GACTTCACAG
  AGAAATTATT TGAGTGTAAA ATTCAAGCCA TACCTACAGG AAAATCCTTT TTGAAGTTTG
  R
  AATTGTTTTT ATAACCAAAA AAATAAAAAA ATAAAAATCT GGGTAAGATC TGGCAGGATG
  AAGCCACCTG GAACCCTAGT GATAGCATAG AATCCTGTGC CATGGGGGTA AAAGGTTGTT
  GTTAGGGGCT TCTGCTGCAC GGTTGTTCAA GAACACGGGT CTCCTGTCAT CTGTGCCAAT
  GCCCCCCTTC CTCCATCCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136249562	ENSMUSSNP345102	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50562321					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32602441 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr199954	regulatory region 199954	960 bp proximal
Rr203547	regulatory region 203547	1654 bp proximal