rs50573077 SNP Detail

Summary

• ID
  rs50573077
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7626189 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTT TTGTTTTTTG GTTTTTTTTT
  W
  AATTGAATTA GCTACCTTTT CTGGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145104473	ENSMUSSNP5133402	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
ss325291025	CHEV_17_7563139	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50573077					SNP	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7626189 () rs orientation: forward

Symbol	Name	Function Class
Gm49630	predicted gene, 49630	within coordinates
Gm64723	predicted gene, 64723	1233 bp upstream
Rr336065	regulatory region 336065	1212 bp proximal