rs50574530 SNP Detail

Summary

• ID
  rs50574530
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:84995205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGTGGAT GAACACCCTC
  ACAGAAGCAG GGGGAGGGAG GATTGATAGG GTGTTTCCAA GAGGGAGGGA AACCGGGAAA
  GAAGATAACA TTTAAATAAA GAAAGAAAAT ATCCAAAAAT AAAAAAGTTT TTAAAAAGAC
  TATGGAGCAA ACAATGGGGA ATTGCTTATC ATTCCATCAC AAGAATATCC TAGAACTGTA
  M
  AAAGTAAGCA AGAAGAAATG CTTAGAAATT AATCGTGATT TGTATACAAT AATGTTGATT
  CAAGTAAAAT GGAGGCCTAA GAGTTTGATT TCCATAACCT CCCTAGTATA TCAAAGGTTT
  TTACAAAAGG TATATTTGTG CATCCTAGTG TGCATTGCTA ATAATACACC TTGATACATC
  ATAATGGTTC CATATCCCCC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133351329	ENSMUSSNP293277	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs50574530					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84995205 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Exoc6b	exocyst complex component 6B			Intron
				Noncoding-Transcript-Variant
Rr633107	regulatory region 633107			926 bp distal
Rr633108	regulatory region 633108			1009 bp distal