rs50575494 SNP Detail

Summary

• ID
  rs50575494
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:86986065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG GGGGAGTTAC CAACACAGGC
  Y
  GAATCCAATA CCTAAGTGAA TGGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss139889487	ENSMUSSNP1187571	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss324692368	CHEV_14_87148436	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs50575494					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:86986065 () rs orientation: forward

Symbol	Name	Function Class
Diaph3	diaphanous related formin 3	within coordinates
Gm41224	predicted gene, 41224	1509 bp upstream
Rr297552	regulatory region 297552	135 bp proximal
Tssr4496	transcription start site region 4496	476 bp downstream
Tssr129931	transcription start site region 129931	439 bp downstream