rs50578298 SNP Detail

Summary

• ID
  rs50578298
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128661510 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTGAGTTT AAGGCCAGTC
  AAGTTCTAGG ATAGCCTAAG GACACAGAGA AACCCTGACT CGAAAAACCA AAAACAACAA
  CAACAACAAC AACAACAACA AAACAAAACA AATAAAAAAC CTCTTTCCAA GCTGGGCATA
  GTAGTGCATG TCTCTAGTCC TAGCACTCAG GAGACAGAGG CAGATGAATT TCTGTGAGTT
  S
  CAGGCTAGCT TGGTCTACAT AGTGAGTTCC AGGACAGCCA GGGTGACATG GAAAGATCCT
  GTCTCAAAAC AACAAAAAAC AAACTCTTTC CATTTTTTAT AAAGAGAAAT TGGGGACTTT
  AGTTCAAAGA AAAGGTATAA GCTTTGAAGT AGGAAGGACA AAAACATTTG CATTGAAATA
  GAAGTCTATA TCAAGTGCAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss147740841	ENSMUSSNP5107163	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
ss323536229	CHEV_10_128262697	CHEVERUD	SCREENING_POP	f	SNP			C		G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs50578298					SNP	C	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128661510 () rs orientation: forward

Symbol	Name	Function Class
Sarnp	SAP domain containing ribonucleoprotein	within coordinates