rs50584481 SNP Detail

Summary

• ID
  rs50584481
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141431883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTAATTAA AATATTAGGC
  ATCTAATCTT TATAAAAATC AGCCTACCTT CAAAAATACC TTGGATACTT TTCTTGGTTC
  TGTATCTAAA GCTCATAAAC AGGACACCTA TGGGAAGAAG TCTTGGGTTT TCTTCAAGAC
  AGGAGGGAGG GGCTGAGAAA CATTAATATT CAGCAGTTTC AAAATTGAGT TTCTTAGAGC
  R
  GTGATCTCAA AGTAGCAGTC TCTAGGCCCC ATAGGGCTTA TCAATTATTG CATTTAGCCC
  CCAATACATT GTCCCACTAA CACATTTTGA TGACATTTTA AGTATTTGGT CTTAGTAAAC
  AGATGCTATC ACAAAATATT CACATTCCAA ACTTGTATTG GCTATTAAAT TTAGGGTTAT
  GGCTCCAAGA GCCTGCATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61091290	NES16613394	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50584481					SNP	A	A	G	A	A	A	A	A	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61091290	NES16613394	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141431883 () rs orientation: forward

Symbol	Name	Function Class
Unc5c	unc-5 netrin receptor C	within coordinates