rs50594325 SNP Detail

Summary

• ID
  rs50594325
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:107457582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAATGTAAG ATTCAGAACT GTCATCAGAG AGGACTAGCA
  AGGGATCTTA GGTACTTTTC ATAGGACAAA GAACAATGGT GTTCCCCTCT TGTCACATCC
  W
  CTACTTCTTC CTCATCCATC TTTTATACTT CTTTTGTTGG TCCTATATTA TTCAATCTTG
  CTCTTACCAT CAAAATTCTA CAGACCATTA GCTACACTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145102900	ENSMUSSNP1547415	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50594325					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:107457582 () rs orientation: forward

Symbol	Name	Function Class
Serpinb10	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10	within coordinates
Tssr8339	transcription start site region 8339	838 bp downstream
Tssr8340	transcription start site region 8340	794 bp downstream