rs50599833 SNP Detail

Summary

• ID
  rs50599833
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8857767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATAACTAA AAAATAAAAA
  TATTTTAAAA AATTGTGTCT AGAGATACGT CCTAATACAA ATGACCAATG TCTTGCTAAC
  AAGGGTGTCA AGACAATTAA AGCAGGAAAG AAAGGATATT GCAACGCGAT GATGCCACAA
  ATCGGATATC CACATGTGTA TAAACACAAA TATACCTAAT ACCATGACAC TCCTGTTACA
  R
  ACAATGCAAA CAAGAAACTG TGAAGACAAC CTGTAGAATC GGAGGAACAA GATAGGAATC
  ATACATCTGC CTTGGGACCG ACATGCAGAA CATAAAAAGT CATAAAAGGA ATGACAAAGG
  GGTAGTATTG ATGGAGAGTA GGGAAGCCAT AAGAATGCAA GTATGTTAAT GGTTGCTTAG
  GGACTGGATG TGGGTGTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146769163	ENSMUSSNP2957849	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss323246157	CHEV_10_8701821	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50599833					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8857767 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	834 bp proximal
Rr223852	regulatory region 223852	1311 bp proximal