rs50600064 SNP Detail

Summary

• ID
  rs50600064
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:93130760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTCATG GTTACTTAAA
  CTACTCACTA CCATACCATT TTAGACATTG TTTTACCTTT GCAAAGTCTA TTTTAATACA
  TGCTTACACT GTGTATCACA GAATAACAAG GATCAACCCT GTTTCTACTA CATGGAAATA
  TACTGTTTCC TCTCTTCTCT TGCACCCTGA TACACAGAAC AAAAAAAAAA AAAAAGGAGT
  R
  GACTATAGTA GCTATCCTGT GTCACTCAGG CATTGAAAAT CAGGAGTGCA TGTATTACAA
  CACACCATGA TATTAGATTG TGTGTGTAGC TGTATAACAT GGAGTTAAAC AGTCCATCAA
  TAAGTCTGAT GTGGTCATTT TACTGCAGAC AGGTTGTATG AAGCCTGAGT CCCACATTTT
  ATACTCTCTA CAAATTATAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss137969128	ENSMUSSNP6390998	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs50600064					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:93130760 () rs orientation: forward

Symbol	Name	Function Class
Gm59657	predicted gene, 59657	within coordinates
Rr387632	regulatory region 387632	728 bp downstream