rs50602020 SNP Detail

Summary

• ID
  rs50602020
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:101439260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTT TCTCTTGCTT GCAAAGCAAA
  C
  ATTTTATCAA TTGAGCGATT TTCTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146736190	ENSMUSSNP1427819	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs50602020					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:101439260 () rs orientation: forward

Symbol	Name	Function Class
Prr30	proline rich 30	1494 bp upstream
Tssr130025	transcription start site region 130025	1501 bp upstream
Tssr130026	transcription start site region 130026	1406 bp upstream