rs50606494 SNP Detail

Summary

• ID
  rs50606494
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145286373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTGGTCC ACCACCCAAC AATTAATCCT
  CCCTCTTCCT GCTTTCAACC TGTCTATCTG AACCATGCTC TGCCTCACCC CATTTCACAA
  CTAATTTTTG TTTATTGCAA GATTACACTT CTGTATGTCC AGATGTCCTG ACACAAAAAT
  A
  TCCACTTTCT GCCCCAGGTT CTCGTGAGCT GGCTTGGTAT ATTGACCAGA CAGTTTTGGC
  AAATCTTTTC AAACAGGCCA TAGATCTTCA GGTGTTCTAC TTTGACAGCA ATGAGCTATT
  CGTCTTCCAG AGTCAGTAGA ACTGTGATTG                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss147865731	ENSMUSSNP3954827	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321414267	CHEV_4_145149706	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs50606494					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145286373 () rs orientation: forward

Symbol	Name	Function Class
Gm21978	predicted gene 21978	826 bp upstream
Rr398684	regulatory region 398684	1553 bp downstream