rs50606750 SNP Detail

Summary

• ID
  rs50606750
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:24021156 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGTTTTC ACGGGAATTG
  CAATGAACCT GTAGATTGCT TTTGGTAGAA TGTCCATGGA ATATCATTTC ATCTTCTCAT
  ATCTTCTTCA ATTTCTTTCT TTAAAAAATA TCATACAAGA CTCTCCCTTG CTTGCTTAGA
  GTTACCCCAA GATATTTTAT ATTATTTGAG GCTATTATAC AGAGGATGAT GACTGATTAA
  K
  TGATTGATTG ATTGATTTAT AGTTAATCTT GTATCCAACC ACTTTACTCA AAGTGTTTGT
  GAGCTGTAGG AGATCCTTGG TGGAATTTTT AGGGTCATTT GGATATACTA TCATATCTTC
  TGTAAATAAC TATACTTTGA TTTCTTTCCA ATTTGTATCC CCTTGATCTC CTTTAGTTAT
  CTTATTGCTC TAGCTAGAAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss148763133	ENSMUSSNP604537	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs50606750					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:24021156 () rs orientation: forward

Symbol	Name	Function Class
Gm53062	predicted gene 53062	within coordinates
Rr36322	regulatory region 36322	956 bp proximal
Rr395981	regulatory region 395981	1055 bp upstream