rs50618179 SNP Detail

Summary

• ID
  rs50618179
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8857644 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGCACCC ACATCAGGTA
  ACTCACAACC ATAATAACTT CAGCTCCAGG GGATCCTCTT CTGGACTGCA CAGACCAACA
  CACATACATG TCCACATATC CATATATACA TAACCACATA GTCACATAAC TAAAAAATAA
  AAATATTTTA AAAAATTGTG TCTAGAGATA CGTCCTAATA CAAATGACCA ATGTCTTGCT
  R
  ACAAGGGTGT CAAGACAATT AAAGCAGGAA AGAAAGGATA TTGCAACGCG ATGATGCCAC
  AAATCGGATA TCCACATGTG TATAAACACA AATATACCTA ATACCATGAC ACTCCTGTTA
  CAGACAATGC AAACAAGAAA CTGTGAAGAC AACCTGTAGA ATCGGAGGAA CAAGATAGGA
  ATCATACATC TGCCTTGGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss146769151	ENSMUSSNP5626520	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss323246153	CHEV_10_8701698	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50618179					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8857644 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	957 bp proximal
Rr223852	regulatory region 223852	1434 bp proximal