rs50630210 SNP Detail

Summary

• ID
  rs50630210
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153537078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGCTGAGT GTTCTGACCT
  TCAGACATCT GAAGGATTAG TAGCCTAACA TTTCCTGAAA AAAAGTGAGC CTGAGACCAC
  CACCAGTCTG TCACCACAGG GCCTGGACAG GGAACTAGGT TGAGATGACT ACCAAGACAG
  TGCCAGGTAG GCCTGGACAG GCTCCCAGGA CAGGAAGCAA GCCAAAGGCG GGAAGAAGCC
  M
  ACCTGGGACA GCAGGCCCCA GGCAGGAGTG AGCCCAAGAC AAATGGCCGC ACAGGTGGGC
  CGGTAGAGGA GCTGGCCTGA GATGAACACT AATCTGTCGC CCTCCAGGCC TAGAGGGTGG
  GGACAGATCA TGCCCAAGAT GACTCCTGCC CTGTGCCATA TTGCACAAGC AGGGCATAGC
  ACTCCTGAGA CCTCTCCTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss136113975	ENSMUSSNP3363955	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50630210					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153537078 () rs orientation: forward

Symbol	Name	Function Class
Gm25757	predicted gene, 25757	149 bp downstream
Rr587767	regulatory region 587767	831 bp distal
Rr587768	regulatory region 587768	688 bp distal
Rr587769	regulatory region 587769	497 bp distal
Rr587770	regulatory region 587770	within coordinates
Rr587771	regulatory region 587771	216 bp distal
Rr587772	regulatory region 587772	369 bp proximal