rs50632066 SNP Detail

Summary

• ID
  rs50632066
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:34871607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATATACATA TGTATACTTA
  CATACATGCA TATATATGAA TGGACCAGAC AGAGTAGGAT AAGATGTTGC TTAGCCCCAT
  CCTGGCCCCT GTCCTCATTC CAATAAGGAA TGTGATCTCA TAAATAGATA CAGGCTCCCT
  ACTTGTCTGC TGTGTTCTAG CCACAGCCCA CAAACAACTA CCTATCTTCA TCCCATGGCC
  Y
  AGGGATCCCA TCACCTGGAC GGCAGACCCC AGACCATAGA GTGTTTTGGT AGGAAAATTT
  TGGTCCAAGT TACCTGGAAT ATGATCCAGA AAACAAAACA AAACAAAAAC AAAACATAGA
  CTACAGGAGG GCTCAATTCC CTTCCCAACA GGTGTAGGGG CTATCCTGTG ACCTATGAAC
  TTGGGGCCAG GGCAGGTCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss148859865	ENSMUSSNP3317843	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs50632066					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:34871607 () rs orientation: forward

Symbol	Name	Function Class
Gm47150	predicted gene, 47150	within coordinates
Rr275718	regulatory region 275718	194 bp proximal
Rr283182	regulatory region 283182	1857 bp distal