rs50637116 SNP Detail

Summary

• ID
  rs50637116
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:100140123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGTG ACCCACGCCT AGCTATGTAT
  W
  CAGGCACTGG GAACTCTAAC TTGGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145533058	ENSMUSSNP287213	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50637116					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:100140123 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19484	CpG island 19484	1802 bp proximal
Gm72028	predicted gene, 72028	within coordinates
Rr652130	regulatory region 652130	1866 bp distal
Rr652131	regulatory region 652131	1376 bp proximal
Rr652132	regulatory region 652132	1503 bp proximal