rs50638326 SNP Detail

Summary

• ID
  rs50638326
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:81473248 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C CCCCAAAACT CCCAGGGACC AAACCACCAA CCAAAGAGAA
  CACAGGAGTA GCCATGGCTT CAGCTGGATA TGTAGCAGAG GATGGCCTTA TCTGGCATCA
  Y
  TGGGAAGGGT CTGTGGAGGC TTGATGAATA AGGATAGGGG GATGCTAGGG CACTGAGGCA
  GGAGTGGATG GGCGGGTGGA AGAGCACCCT CATAGAGGCA G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146443206	ENSMUSSNP786194	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50638326					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:81473248 () rs orientation: reverse

Symbol	Name	Function Class
Adgrv1	adhesion G protein-coupled receptor V1	within coordinates
Rr277294	regulatory region 277294	1753 bp proximal
Rr285047	regulatory region 285047	965 bp distal
Rr285048	regulatory region 285048	352 bp proximal