rs50641307 SNP Detail

Summary

• ID
  rs50641307
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48032732 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATGAAACT CAGAATTTAT AATTCTTTTT TGTTTTGTTT
  TGTTTTTCGA GACAGGGTTT CTCTGTGTAG CCCTGGCTGT CCTGGAACTC ACTTTGTAGA
  Y
  CAGGCTGGCC TCGAACTCAG AAATCCGCCT GCCTCTGCCT CCCGAGTGCT GGGATTAAAG
  GCGTGCACCA CCATGCCTAG CTCAGAATTC CTAATTCTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145708711	ENSMUSSNP6027482	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50641307					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48032732 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	781 bp proximal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	768 bp proximal