rs50658135 SNP Detail

Summary

• ID
  rs50658135
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129471498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTACGCCA TCACAAATTA
  ACTGTGATGA CCCGTTGAGC TGAACTGGAC ATCCTTATGT TTGCACATGG TGGGCTGACA
  GCTAATATTC AACTCTGCCC TCCTCAGATT ATAACTGACA GCAGGGTCGG TTTCTGCTTT
  TTACTTGACT GTCTCTTCTC TTTAGGGCAG TGGTTCTCAG CCTTCCTAAT GCTGGGACCC
  R
  TTAATACAGC TCATTTCCTC ATGCTGTGAT GACTCCCAAG CATAAAATTA TTTTCATTGC
  TACTTTGTAA CCGTAATCTT GCCACTGCTA CGACTTTTAA ATAATTTTAA ATATAAATAT
  CTGATATACT GGATATCTGA TATGCAACCT GTCTAAAAGT GCTTTTGGAT GCCCAAAGGG
  GTCGAGACCC ACAGATTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147442913	ENSMUSSNP3152489	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50658135					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129471498 () rs orientation: forward

Symbol	Name	Function Class
Fam167b	family with sequence similarity 167, member B	within coordinates
Rr600279	regulatory region 600279	1859 bp distal
Rr600280	regulatory region 600280	1746 bp distal
Rr600281	regulatory region 600281	623 bp distal
Rr600282	regulatory region 600282	386 bp distal
Rr600283	regulatory region 600283	834 bp proximal
Tssr43532	transcription start site region 43532	807 bp downstream
Tssr43533	transcription start site region 43533	816 bp downstream
Tssr43534	transcription start site region 43534	830 bp downstream