rs50659876 SNP Detail

Summary

• ID
  rs50659876
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55206932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGG GGACCTGGGC TCTTCTTTCT
  K
  TGGCCTCCTT ATGCCCAGAA TCTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52723009	NES15567953	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		T	G	G	G		G
ss139574363	ENSMUSSNP212338	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
ss324641236	CHEV_14_55588312	CHEVERUD	SCREENING_POP	f	SNP											G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs50659876					SNP	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723009	NES15567953	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55206932 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	1209 bp downstream
Rr407057	regulatory region 407057	1692 bp distal
Rr492380	regulatory region 492380	670 bp distal
Rr492381	regulatory region 492381	186 bp proximal
Tssr125718	transcription start site region 125718	792 bp downstream
Tssr125719	transcription start site region 125719	700 bp downstream
Tssr125720	transcription start site region 125720	675 bp downstream
Tssr125721	transcription start site region 125721	663 bp downstream
Tssr125722	transcription start site region 125722	215 bp downstream
Tssr125723	transcription start site region 125723	173 bp downstream
Tssr125724	transcription start site region 125724	133 bp downstream
Tssr125725	transcription start site region 125725	692 bp upstream
Tssr125726	transcription start site region 125726	717 bp upstream
Tssr125727	transcription start site region 125727	750 bp upstream
Tssr125728	transcription start site region 125728	1558 bp upstream
Tssr128746	transcription start site region 128746	1500 bp upstream
Tssr128747	transcription start site region 128747	1476 bp upstream
Tssr128748	transcription start site region 128748	1432 bp upstream
Tssr128749	transcription start site region 128749	1401 bp upstream
Tssr128750	transcription start site region 128750	1379 bp upstream
Tssr128751	transcription start site region 128751	1373 bp upstream
Tssr128752	transcription start site region 128752	1314 bp upstream
Tssr128753	transcription start site region 128753	1115 bp upstream
Tssr128754	transcription start site region 128754	1045 bp upstream
Tssr128755	transcription start site region 128755	1240 bp downstream
Tssr128756	transcription start site region 128756	1257 bp downstream