rs50661164 SNP Detail

Summary

• ID
  rs50661164
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:5858523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAAGGGAA ATGCTACATT
  TATCTTTGTT GACTGTTGGC AAGAAGATTG ATGCCTACAC AGTTGGTGCT GTGGATTCTG
  TAACCTCAGT TTCAACCAGT TGCAGGTGGG AAGTATTAGG GTGAGGTGGG AAGTGTACCT
  CTGTTGAACC TAAGTGCTTC TGTTCTTCAT TATTCCCTAA GCAATACTGT ATAATGTCTG
  K
  ATAGCATATA CATTATGTTA AGTATCGTGT GTTCCTGGAG ATTATTTGAG ATTTACAAGA
  GGATATAAAT AGGTTAGGTT AAGTGCAAAT GTTATACCAT TTAACTTAAG TGACCACATG
  AATTTTGGTA TTTAAGGGGA GCGGTGTCCT GGAATCAAGC CCATGCCCTA AGCCCTGGAG
  TGAGGAGGTG AAATAGTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146275405	ENSMUSSNP2737674	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50661164					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:5858523 () rs orientation: forward

Symbol	Name	Function Class
Nudt5	nudix hydrolase 5	within coordinates
Tssr16009	transcription start site region 16009	855 bp downstream