rs50663282 SNP Detail

Summary

• ID
  rs50663282
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91338130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTACGTGGCT CTTGAGTGTC TGTCTGTCCT CTCCCTTGGC
  TGTGGGGACT CTCTGGTTCT CCACCTCCGT CAGTGTCTTT GTGGAACAGT GTTGCGCATG
  S
  GTTGGAGATT CTTGCTCTGG TGTCTCAGCA CTGAGCTGGG GTGGCCAGGG AGCTCTCCTG
  TTGTCTTCAG TTCATTCTTC TGAGACCATG AGCGTTGCTG                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60908893	NES16221053	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	G	C	G	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50663282					SNP	C	C	C	C	C	C	C	C	C	G	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60908893	NES16221053	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91338130 () rs orientation: forward

Symbol	Name	Function Class
Gm67851	predicted gene, 67851	within coordinates
Rr634456	regulatory region 634456	765 bp distal
Rr634457	regulatory region 634457	within coordinates