rs50680832 SNP Detail

Summary

• ID
  rs50680832
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61333038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATGAAATCT TCCCCTGCAG ACAAATTTAT TTGCTCTCCT
  TGCTTCTGAT TGATGGAGAA TGTGTATTCA AATAGAGAAT GATATCAGAC CCAATCAGGA
  R
  AGAGATCTCA TTTCTAGGCA TGAACATCAA ATGCTGCTGT AACCTTGGAG ATCTCCATCC
  ATGCTGCTGA TTCATAGCTC AAGCACATCA CCCTGGTTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss144742778	ENSMUSSNP3767565	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50680832					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61333038 () rs orientation: forward

Symbol	Name	Function Class
Gm54953	predicted gene, 54953	1696 bp upstream
Gm72252	predicted gene, 72252	within coordinates
Mir344d-1	microRNA 344d-1	98 bp upstream
Mir344d-2	microRNA 344d-2	1982 bp downstream