rs50682774 SNP Detail

Summary

• ID
  rs50682774
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101128828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGACTTGA CAGCTGAGGT
  CTTGATCATT TTCCGGGGGA TCCATCTCCA CCCAGGAGCC CCTCCAGCTG CAGGACCAAC
  TTCAGTGAAA TTTGAGGGTG CCCTGGAGGA GGGAGAAGTC CATCTTTTTG TTTCCGAATA
  AGTCATTGGC CACACGCCAC ACAAACAACA AATGAAAGCA TGGCAGGTGT GGGAATGAGG
  W
  ACACAGGGAG CACGTGCAGC ACCCCCCAGG GAGCCACACA GTATGCCCAC TTCTGCTTGG
  GGTGATGCAA GATTCTGCTT TTCCAGCATG AGGCAGCCAG TGACGTGAGG GAGGCACCAG
  GAATGCAGGG ACTGGTAGAG GCCTGCATGG GAAAGCATTG TGTGTTACCA ATGAGTGATC
  TGAGTGATCA ATGAGTGGGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135545515	ENSMUSSNP6949540	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50682774					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101128828 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	1414 bp distal