rs50693371 SNP Detail

Summary

• ID
  rs50693371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73419439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAGGGGA CCAGGAAGGA
  CACAGCAGGA GCAGACATGC AGACAGAACC TATCAACTCA TTGCCAGTCA CCACGTTACT
  ACACAGAAGT TACACAGTTC CTCCAAGCAA GAGACAGAGG AGGCAAGGCA GAAATAAGAA
  TCTACATAAA GATAAGGAGA TAGGAAATGT ATCAGCTATT CCTGAAGATA ACTAGCTGTC
  R
  AGAGGAAGAG GAGAAATGTG GTATTATGTG CCTAGGACGT GTGAAGTAGA ATAGGTCACG
  TGATAGTACA AAGTTGTGAG AAAAGAAAGG ATCAAAGTAT CTTTACAAGC GAGGATATAA
  TCAAGTGAGG GATGGGGTTG CCATCCCACA ATCACAGCTC TGACCCATGA TAATTCTTGC
  CTGAAAGAAT TACAGGGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ
ss61644182	NES17584922	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NOD/ShiLtJ
rs50693371					SNP	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61644182	NES17584922	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73419439 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	1962 bp proximal
Rr264129	regulatory region 264129	940 bp distal
Rr264130	regulatory region 264130	1983 bp proximal