rs50703339 SNP Detail

Summary

• ID
  rs50703339
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:75989658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTG CAGGCCAGGT CCAGGTGAAA
  G
  CCCCAGCCCC ACCCCTCCCC CACTA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324437240	CHEV_13_75978987	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs50703339					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:75989658 () rs orientation: forward

Symbol	Name	Function Class
Glrx	glutaredoxin	within coordinates
Rr482793	regulatory region 482793	1619 bp distal
Rr482794	regulatory region 482794	430 bp proximal
Tssr120401	transcription start site region 120401	1658 bp downstream
Tssr120402	transcription start site region 120402	1611 bp downstream
Tssr120403	transcription start site region 120403	1495 bp downstream
Tssr120404	transcription start site region 120404	1454 bp downstream