rs50711745 SNP Detail

Summary

• ID
  rs50711745
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:71962999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACATAACTA TGACAGCTAC ATTCTATAGT
  ATTTTTATTA TTAATACCTT ACATCCTAAA AAGCAGTGGT TTAAAGAACC CCTTCCATAT
  CTGTTAGGCC Ctaggtcagg aatcctggag agatttcact gggaagctct tggggttgac
  R
  ctaagttgtt ggctgaggac gcagcctgtt tggagcctga ggatctgact cacaccattg
  gctggcaagt gggtgttaat tgttggcaag atggttaggt gcctccctgc aaggggcctc
  cctgcaggcc gcttcagaat tctcacagca                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss144648006	ENSMUSSNP3577961	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss319787563	CHEV_1_71970414	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs50711745					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:71962999 () rs orientation: forward

Symbol	Name	Function Class
Gm70455	predicted gene, 70455	734 bp downstream
Gm70563	predicted gene, 70563	1915 bp upstream