rs50712322 SNP Detail

Summary

• ID
  rs50712322
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33151822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTAGTCT GCTAGCTGTG
  CCCAGGTCCA AGATATTCAC AGCCTTCAAA AACAGTGCCA ACGGATTCGG TAATCAAACA
  CACATGTGGG AGACGTTTCA GGGACTGAGG GCACACAGGG ATGATGTCGG GGGAGATGGT
  ATGTGTGGAG AATCTCTCCG TGCCCATTAG CAGAGCACAT CTGTCCTGTA ATGCTGACAG
  Y
  GCCTAGCAGC ACCGCTTTAT GTTGCTATGA CAATGTATGA GAGCTCCTAT TCCTCCACAC
  ACTTGGGAGG ACTCCTCAAT TCCCGTGGGT CGCTTCTCCC TCTAACTGTT TATCAGTCAT
  CAAATATTAC ATATTTGTTA AACTAATCAT TTTCTTACAG TCTGCATTTT ACATCTCCCA
  TAAACATGCC CCTATGACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137582088	ENSMUSSNP3103363	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50712322					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33151822 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	890 bp upstream
Rr464869	regulatory region 464869	400 bp proximal
Rr464870	regulatory region 464870	901 bp proximal