rs50713245 SNP Detail

Summary

• ID
  rs50713245
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:127304097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACATCGCAA GAAAAACCTT CTGTGAGTCA GATAGTAATG
  AAGCAAACAC TCGAGCAAAG TGTCATTGCT GGGGAAGGGG AGGCAGGCAG CCCAGCCTGG
  M
  ACTACCTTCC ACAGGGTGGG ACAGCAGCAG CCCAGCCTGG CGCTACCTTC CACGGGGTGG
  GACAGCAGCA GCCCAGCCTG GCACTACCTT CCACAGGGT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321301539	CHEV_4_127087548	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs50713245					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:127304097 () rs orientation: forward

Symbol	Name	Function Class
Gm12947	predicted gene 12947	1506 bp upstream
Rr377159	regulatory region 377159	1795 bp downstream
Tssr43429	transcription start site region 43429	1484 bp upstream