rs50714606 SNP Detail

Summary

• ID
  rs50714606
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8857359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACACACAT ACACAAACAT
  ATACATGCAT ATACACAATA CATATAAACA CACATCCACA TCCACAAACA CACACACGTA
  CACATATACA CAAACACACA CACTTCCACA CATACATATG TACCTATAAT AATAAACAAT
  AATAAATAAA AAATGCCAAA AATTAAAATC ACATTCGTAT AGACTATTGG TAACTCAAGT
  S
  CAACTGTAGA CTTGAGCAAA ATGTTGGAGA GAAAGTTGGG TGGTTAAAAG TTATGCTGCT
  CTTGCAGATG ACCTGAGTTT GGTTCCCAGC ACCCACATCA GGTAACTCAC AACCATAATA
  ACTTCAGCTC CAGGGGATCC TCTTCTGGAC TGCACAGACC AACACACATA CATGTCCACA
  TATCCATATA TACATAACCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52141022	NES15241434	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50714606					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52141022	NES15241434	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8857359 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	1242 bp proximal
Rr223852	regulatory region 223852	1719 bp proximal