rs50715062 SNP Detail

Summary

• ID
  rs50715062
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77922378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGGCTGACC TTGAACTCAC
  AGAGGTCCAG CTGGCTCTGC CTCTTGAATG CTGGGATTAA AGGTGTGCTC CATCATGCTC
  AGCTTAAATA TTTTGTTGTT GTTTGTTTGT TTGTCCATTT GAAGGTATCA AAAGTCAATC
  TCAGCTATCA ACTGAAGCTG AGTATGGTAG CCTATGCCTA TAAATCCCAC GGTCAGAAGG
  C
  TGAGGCAGGA GGATTGTCAA AAGCTCGAGA CCAGACTGGA CTGCTGTGCA AAGCCAAAAA
  CAAAAAAAAA CAAAAATGAA AAGATGCTGA TTTGGTGGAG CTCTGTCCGA CAGCAGCTTT
  CCCTTCAAAT ATCTGTTAGA CCTTTGGAAA TGTGGCAAAA TCTGGTAAGG TGGCTTTGGT
  GGATGGCAGG AGAGTAAAGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136663656	ENSMUSSNP4463041	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50715062					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77922378 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	998 bp upstream
Gm39375	predicted gene, 39375	within coordinates
Gm69108	predicted gene, 69108	1173 bp upstream
Rr683457	regulatory region 683457	1039 bp distal