rs50715317 SNP Detail

Summary

• ID
  rs50715317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122798464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGAACTTG TAAGTAAAAT
  TAATAAATAT AAAATATAAC TTAAAATACA TTTTAAATTA TTCATAGTCT CTACAATGAT
  TATATGTATA AACACAATAT TTTGATATTA CTTCTAAGGA GTATTTTTTA TTAACTAAAT
  TATTTTTCAT GGGGCGTGGT GGTGGTTCAC ACCTTTAATC CCAGCACCTG GGAGACAGAG
  R
  CAGGTTGACC TCTTGAGTTT GAGGCCAGCT TGGTCTACAA GTGAGACAGA TTTTTTTTTC
  TCTGTCAGTG TAAAAGATAA TTAAATCACC AATTCCTGCA CTATCTACAC ATGCCTTTGT
  AAATATGTGT AATAATATTG CTGTTTGATG TTGTTATTAT TATTTCTCTA CTTTAATAGC
  TAAATTTAAT GTGGCAGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135754508	ENSMUSSNP2508640	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50715317					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122798464 () rs orientation: forward

Symbol	Name	Function Class
Myoz2	myozenin 2	1391 bp downstream