rs50715538 SNP Detail

Summary

• ID
  rs50715538
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:101439276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGTGGAGG CTTAGAGGTT
  GCTGTCAGAT GTCTTTCTAA ATCTCTTCTC CACTTTACCT TTTGCGACAG GATCTCTCAC
  TGAGCCTGGA GCAGCCTAGC CAATGAATTC CAGTGATCTG CCAGTCTCTT CCTCCCCACT
  GCTGGGTTCC GGTAAAATCC AGTTTCTCTT GCTTGCAAAG CAAAAATTTT ATCAATTGAG
  T
  GATTTTCTCA GACAATTTTC CAAAGTATTT TCATGTGTAC TTCATAGATT GTTTATATTC
  AAATGTTTGG CCCATCATTT AATTGGTTTT TGTCATTGAA TTTATTTTTT AAGTTTTTAT
  GTGTATGTGT GTTTTGCTTG CATGTATATC TATGTACTGT GTTCGTGCCT GGAACCCTCA
  GAGGCCAGAA AAGGGCAGCA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146736199	ENSMUSSNP121034	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs50715538					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:101439276 () rs orientation: forward

Symbol	Name	Function Class
Prr30	proline rich 30	1510 bp upstream
Tssr130025	transcription start site region 130025	1517 bp upstream
Tssr130026	transcription start site region 130026	1422 bp upstream