rs50721575 SNP Detail

Summary

• ID
  rs50721575
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:100005793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGAAGACA GACAGAACAG
  CATTCTGTCT CTTACAACTG ACAACTTCAT TGCAATCACC ATTAAGTCTA AACATGCATC
  CTCACATATA TACAGCTGTC CTGGGGCCAC TGATCATATA TTGCTTCTCC TATGAAATAA
  GCACGAGTTA CGGCACACCC ACCACCAAGC TGAGTTCCTG TCAGTGATTA TCCCATGAAA
  Y
  TTTTTTTTTT TTTTTTCGAG AAAGGTCTCA CTGTGCCAGG TTGGCCTGGA ACTCAGAGAG
  ATCTACCCAC CTCTGCCTCC CAAGTGCTAA GATTAAAGGT GTGCACCACC ATGCCGGGTG
  CAAGAGAACA TTATTAAATC TGATATTTCA GGATGCAATC ATGATGGAAG AATTTGCTAA
  CACCGGCTGG AGAAGCCCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145079703	ENSMUSSNP2943471	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50721575					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:100005793 () rs orientation: forward

Symbol	Name	Function Class
Rr269933	regulatory region 269933	393 bp distal