rs50726277 SNP Detail

Summary

• ID
  rs50726277
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27799633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAGAGGT TTCTGTTTTC
  TATAAGGGGA AAGATGAGAA AAAAGGAAGC TTTGACCAAA GACAGGAAAT TTTTTTTTAA
  AAAAAATGGA GGGAGAAGGA AAAAAGGGAT TAAAAAATAA GGGTTAAGGC TGGAGAGATG
  GCTCAGTGGA GAGATGGCTC AGATGGCACT GGCTGTTGGC TGTTCTTTCA GAGGACCTGT
  R
  TTCAGTTCCC AGCACCCACA TGGTGGCTGT GGAGAGACAG AGACAATGAC AGACAGACAG
  AGTTTGTGTC TGTTCACTAC CAAGGTTTGC ATGTGTTTCT GCCCTCACCC ACCTCAGTGG
  CTAGCTGCTT TCCTGCTGTC CCCGACTCAC TCCTCAGAAA TGATAGCAGT TAGTATGTGT
  GAACAGTCCA CCTCCTTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148631765	ENSMUSSNP5847023	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50726277					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27799633 () rs orientation: forward

Symbol	Name	Function Class
Fcgbp	Fc fragment of IgG binding protein	within coordinates
Gm10935	predicted gene 10935	within coordinates
Gm21925	predicted gene, 21925	within coordinates
Tssr65362	transcription start site region 65362	1046 bp upstream
Tssr65363	transcription start site region 65363	1087 bp upstream