rs50735097 SNP Detail

Summary

• ID
  rs50735097
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118406355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCTTGCAATG AACATTTGCA AGCAAAGACG TGTGGACAAG
  AGGGTACACT GTGTGACACT GGGACACACT ACAGCTTCTA AGAAGAGGTT TTTTTCTCTG
  A
  TGGGGGTGGG TCGAAAGGGT ATAGGCTGGG TATGAGAGAG GAGGGGGACA CGAGTGGGAC
  TGGGGTGCAT AATGTGAAAT TTACAAAGAA ACTAATAAAA C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149162367	ENSMUSSNP3396935	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50735097					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118406355 () rs orientation: forward

Symbol	Name	Function Class
Gm25076	predicted gene, 25076	1710 bp downstream
Gm73266	predicted gene, 73266	953 bp upstream
Rr618847	regulatory region 618847	1777 bp distal
Rr618848	regulatory region 618848	535 bp proximal
Rr618849	regulatory region 618849	904 bp proximal
Rr618850	regulatory region 618850	975 bp proximal