rs50740571 SNP Detail

Summary

• ID
  rs50740571
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:14440239 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AAATGTATAC ACAATATACA TTTAATATAA ATTTACATAT
  AATAGCTGAT GCTGATAATT TTGCAGATTG ATTATAAACT GAGAGCACAC GCTCCAAAGG
  Y
  TATGGTATCA GAGAAATTAG ACATGAACAG CTGGAGAGAA TGTGTCAGGC AGCAAGACAG
  GACAGCTGCA TGGGCTGACC TGTGCAGGAT AGGACCACAG T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146647377	ENSMUSSNP3412513	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50740571					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:14440239 () rs orientation: forward

Symbol	Name	Function Class
Gm29992	predicted gene, 29992	1840 bp downstream
Gm50095	predicted gene, 50095	1205 bp upstream
Rr534283	regulatory region 534283	924 bp distal