rs50741889 SNP Detail

Summary

• ID
  rs50741889
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:86987583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGCTACTT GGCATAGTTT
  TAGCACATGC CAGTTATCTT TCTGAAATCT GTAAAACTCA GGTATTTCCA GAAGACCGTC
  TTTTTCTCAG TGTCCCTGTC AGCAGGAGAA TCAATAGTAT CATTAGGAAG AGCTCACATA
  GACTGAGTGC AAGTGCGTCA GTGTGGCGTG GTGTAGTTCT CACAAGTCCT ATAAAAAGCA
  R
  GTAGAACTGA TGCCCACTGA TGGTTGCTTT CATCTGCGGA AACTGACGTG CAGACAGAGT
  CAGGATCTGT GATTACCAAA CAGCAAAGCT GTGATTCAAA GGCAAGTCAG CTCTGTAAGG
  TTCGGCTTCT TTGAACACAC ATTAAGTCAT GTTGTAATTT TAACGCTTCA ATCTCTTTTT
  CACAACTTCA GTACAAACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ
ss62495631	NES17274123	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ
rs50741889					SNP	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62495631	NES17274123	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:86987583 () rs orientation: forward

Symbol	Name	Function Class
Diaph3	diaphanous related formin 3	within coordinates
Rr297552	regulatory region 297552	782 bp distal
Tssr4496	transcription start site region 4496	1029 bp upstream
Tssr129931	transcription start site region 129931	1059 bp upstream