rs50745723 SNP Detail

Summary

• ID
  rs50745723
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45356880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT ACAGAGGAGC TTTCCCATGT
  Y
  CCTGTGTTGG GGACCTAGGA TCTCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149142279	ENSMUSSNP2400823	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs50745723					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45356880 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19081	CpG island 19081	1788 bp distal
Cpgi19082	CpG island 19082	within coordinates
Dbp	D site albumin promoter binding protein	within coordinates
Tssr66618	transcription start site region 66618	1924 bp downstream
Tssr66619	transcription start site region 66619	1236 bp downstream
Tssr66620	transcription start site region 66620	1208 bp downstream
Tssr66621	transcription start site region 66621	314 bp downstream
Tssr66622	transcription start site region 66622	356 bp upstream
Tssr66623	transcription start site region 66623	443 bp upstream
Tssr66624	transcription start site region 66624	695 bp upstream
Tssr66625	transcription start site region 66625	739 bp upstream
Tssr72444	transcription start site region 72444	537 bp upstream