rs50746572 SNP Detail

Summary

• ID
  rs50746572
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:58735918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCAC AGAAGCCCAC AAGGGCTGTG
  M
  CTGGTCCTGC ACCACGGCTC AAACA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132214872	ENSMUSSNP3794569	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss323694262	CHEV_11_58658594	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs50746572					SNP	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:58735918 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2935	CpG island 2935	1937 bp proximal
Rr246822	regulatory region 246822	1682 bp proximal
Rr402593	regulatory region 402593	1799 bp upstream