rs50750491 SNP Detail

Summary

• ID
  rs50750491
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164381597 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAACAAATT CAGTGTCAGA AGGACCCCGT GGGTGTATGT
  GCGCATACAT GTGTGCTCCT GTGTACAAGC CTGTATGTGC ACATTTCCCA TCTGCAGAGG
  K
  ATGAGCTGCA TGTCTGATCC TTGAGGATAG ACTCAGGTTT CACATGCTGG TTTATTAACG
  ACTTCATATG CTGTTTACGG AATGTCTTCT GTCTTGGCA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60336980	NES15838293	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G	G	T	G	G	T	G	G	T	G
ss145981164	ENSMUSSNP6255331	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs50750491					SNP	G	G	G	G	G	G	G	G	T	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60336980	NES15838293	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164381597 () rs orientation: forward

Symbol	Name	Function Class
Gm70527	predicted gene, 70527	38 bp downstream
Rr372378	regulatory region 372378	411 bp downstream
Rr422241	regulatory region 422241	911 bp distal