rs50751748 SNP Detail

Summary

• ID
  rs50751748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140539873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGCTTGAT AAAGTTCCAG
  ACATCCTCCC TGACTGTGGG GGATGGGTGG AAAGAGTGGG TAAGCATCCT CCAAGGGTGC
  TGGCACATTG TGCTGGGGAC CTGATGAGCC TTGTGCTAAA ATGTCTGTCA AAGGGAATAG
  TCTGAGATCA CAGCAAGTGT GTAAGATGAA AAGAAGCGAT GTTTCCGAAG ATCAGACCAC
  Y
  AGGCCTAGGG AACTCAGCAC CGGAGTCAGG GCTACGGAAT TGCGTTGACC TGTCCTGGAT
  CCCGGTGCCT TGGAGCATCG CCCCCTTCTG CCAGCCTCCC CACCTCTTTC CATAAAACCA
  AGGGAAGAGG AGAGGAAGAG GAAGAGGAAG AGGCAGGTCC CTCCTCGATA GTATCTCAGG
  CAGGCGGGGG GGGGGGGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147713820	ENSMUSSNP3417180	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50751748					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140539873 () rs orientation: forward

Symbol	Name	Function Class
Gm13032	predicted gene 13032	within coordinates
Padi1	peptidyl arginine deiminase, type I	421 bp downstream
Padi3	peptidyl arginine deiminase, type III	1914 bp upstream
Tssr44281	transcription start site region 44281	1913 bp upstream
Tssr44282	transcription start site region 44282	1576 bp downstream