rs50756666 SNP Detail

Summary

• ID
  rs50756666
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61903697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCAGCTGC CCCTGGACCA
  GTCTGTGGAC TGGGGGTTGG AGTTTGGGGC AAGAATTCAA AGGTGAGGGT ACAGGCTGGA
  GGGTTTCCCA GGTAGAGGGC AGGTTCTGTG CCTGGTTTAT AGGCAAAGAA GCTAAAGTTC
  CAGAACTGGC CAGGGCTCCC CTAAGGACGA AAAGAGCTGG AATGGAGAAC CCAAAGGTCT
  Y
  TTTACTTCCT AAGCTTTTCT TTGGATGGTA CTCATCTGAT GTGTTTATGC AGCATTGACT
  CTGGGGTCAC AGCCAGACCT TTAAGTCAGA ACCTCAGAGG ACAGAAGCAA GTTCAGAAAG
  AGGAGGCTCC AGCCAAGGCT AATGTCCAGC AATGGCCACT GCAGACCCAA GCTCCAGCAA
  TGTCCCTGAT GCTCACCCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ
ss61280104	NES16886480	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NZW/LacJ
rs50756666					SNP	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61280104	NES16886480	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61903697 () rs orientation: forward

Symbol	Name	Function Class
Tssr93687	transcription start site region 93687	1279 bp downstream