rs50760032 SNP Detail

Summary

• ID
  rs50760032
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:157397547 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTTCCTCC TCCACAGCTC CTCCTGGGCC TGCAAGATTG
  GCTTGGTTTT GTGCCCAGTG TGTTGGGGCC ATAGTGGCTT GATCCTGGGG ATGGCCAGGT
  Y
  TGTAATGGGA GGTAGAGCTC CATGCAGAAG GGAATAATCT AGAAGGAAAT AATTGCACCA
  TGTCCCAAAA AGGCCAGAGG GGACCAGTAG TATTCAAAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145824207	ENSMUSSNP6413761	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50760032					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:157397547 () rs orientation: forward

Symbol	Name	Function Class
Rr421413	regulatory region 421413	93 bp distal
Sec16b	SEC16 homolog B, endoplasmic reticulum export factor	1552 bp downstream