rs50765217 SNP Detail

Summary

• ID
  rs50765217
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:67101749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA ACTCTCAAGA TTACCGTGTC
  W
  TTAGCAAAAT TCACATCTTC TCTGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147343231	ENSMUSSNP6093231	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50765217					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:67101749 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10165	CpG island 10165	273 bp proximal
Gm50164	predicted gene, 50164	within coordinates
Rr356406	regulatory region 356406	985 bp distal
Rr393837	regulatory region 393837	846 bp upstream