rs50768302 SNP Detail

Summary

• ID
  rs50768302
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:64832639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTATCTCA AGCCTCACAT
  AGGATATCAC AATTGGCATC TAGGAATGTG ATGAAGTTGT ACCACCCAGT ATCATTACAT
  CTTAAGCAAG AAAGACAAGA CTCTAGGAGA AATCATCAGG AGCATAATGG TTAGAGATAG
  AGAAACAGGG AGCATGAGTG GGAAACTAAG AACTTCAGAG AAGAACTGAT AAACTCCAAC
  R
  TTGCCCTAGG ATGCCATCAA GCTATTGTCA GAATGCCACT AAGCAGGATC TTAACTTTTT
  AATTGTGTGT GTGTGTTTAT AAGAATCACA TGTGCACATG GTGTCAAAAG AGCATAGACA
  AGGGTGTCCG ACCCCTAGAC TCGAACTATA GGTGGTTGTG AACACTAGGT GGGTGCTAGT
  AACTAAACTT AGGTTCTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss61635086	NES17583754	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs50768302					SNP	A	A	A	A	A	A	G	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61635086	NES17583754	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:64832639 () rs orientation: forward

Symbol	Name	Function Class
Dnajb6-ps	DnaJ heat shock protein family (Hsp40) member B6, pseudogene	446 bp upstream
Gm59451	predicted gene, 59451	300 bp downstream