rs50770852 SNP Detail

Summary

• ID
  rs50770852
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40830870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GAAAAGCAGA ACATAAAACA AACTCTGCTC TCAAAAAAAA
  CTCTGCTAGG AACAATAGCC AGTGAAGCAC AACCACTTCT GGCCTCATTC ATTACAAGCC
  Y
  CGCCCTCCAC GCAATGAAAT CTGAAGACTC TTAAGAAGCA CAGAGAAAGG CACAGGAGCC
  TGAAAGAGGA GTGAACCAGT ACGAAAGCCT ATGGAAAAAG G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145609475	ENSMUSSNP5918843	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs50770852					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40830870 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	43 bp upstream
Gm49847	predicted gene, 49847	178 bp downstream
Rr337560	regulatory region 337560	1130 bp distal
Rr392616	regulatory region 392616	575 bp downstream
Tssr144637	transcription start site region 144637	40 bp upstream
Tssr144638	transcription start site region 144638	51 bp upstream