rs50781482 SNP Detail

Summary

• ID
  rs50781482
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:78663671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATCCATC CCACCATCAG
  GGAGCCTTGT CGCTCTGGAT TGTTCCCACT GCTAAGCCAG GGGCCACCCA GAGGCACACT
  GGGCACTTGA GCAGAGGGCA TGTCCCCTAT GTCCTCAGAC TTACCTGAGC AGGGCTCTGC
  AGGGAGCTGT TCTGCTGAGT CTCCTGCAGT GCCCCCTGCA GGCTTGGGCC TCACCAACCC
  T
  AGGGCTCGCT TCTTCAGCTA GGTGGACAAG GAAGGGAGAT CGTTGTCACA ATCCATCCCA
  GCAACGAGGG AATGCTGAGG GGGCATCCTG CCACTGCCGT CCAGATTCAA CAGTTCCGCA
  CATAGCCACC CTCCTCCCTG TCCCCACCCC CTCCTATCCC GTCGACACCC CCCCAAGTTA
  TCGTTCCATC CCCACACTCC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148188040	ENSMUSSNP4415409	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs50781482					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:78663671 () rs orientation: forward

Symbol	Name	Function Class
Card10	caspase recruitment domain family, member 10	within coordinates
Gm62343	predicted gene, 62343	95 bp upstream
Rr304149	regulatory region 304149	within coordinates
Rr314476	regulatory region 314476	within coordinates
Tssr131989	transcription start site region 131989	84 bp upstream