rs50788378 SNP Detail

Summary

• ID
  rs50788378
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:29191607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGCTTGGTG CTTACAGCCC AAGAAAGTGT CCTAGGCTGA
  CTGCTGGCTT GCTGTCTATC ATTTCAAGGC AGAGGGGGAT CTTTGGAGAC CGGGCTCCAC
  G
  GAGCTGAGTA CAAGAAAGCA AAGGGACGGG GCAAGTAAAT AATTGAGTCC CGCGTTTCCC
  TGAGCCACAG CCACGGGAAT CCCACTTCCA CACTGAGAT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss137517941	ENSMUSSNP2650803	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss323976323	CHEV_12_29826473	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs50788378					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:29191607 () rs orientation: forward

Symbol	Name	Function Class
Gm31333	predicted gene, 31333	321 bp upstream