rs50789457 SNP Detail

Summary

• ID
  rs50789457
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33152324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACATTTTC TTGTGACTCC
  TCTTCATCTT GTCCTTCTTC AGACAGGTCT TCCCTGACTT TCCACTCCTG AACACTCTCA
  CCTACATCCT TCTTCCCTCT ACTCCTGGTT CTTCCCACAC AGTTTTCTTT GTGGAGCACT
  TTTTTTTTTT CAGTGCCCCG ACTGAACACC ATGAAGACTG GGTTCACGTA GGTCTTGTTT
  G
  TGTGTGTAGC CCCGTGTAAA TGTCAGCAAT GTTAACGTAT TAAGTGAATG AAACCCTCAG
  TGGAGGGATG CTGGCCACGA GCTGTGCAGC TACCCAGCTG GGTCCAGATG GAGCCCCCGG
  CAGCAAAGAA ATTAACAAAT GAGCCACCAA TCACAAGCCG TGAATCAGCG CAGTATTTAC
  ATTCCTTTGT CAAACATCAT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137582103	ENSMUSSNP3425505	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs50789457					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33152324 () rs orientation: forward

Symbol	Name	Function Class
Gm59430	predicted gene, 59430	388 bp upstream
Rr464869	regulatory region 464869	within coordinates
Rr464870	regulatory region 464870	399 bp proximal